Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914434.1_cds_XP_016464421.1_57460
CDS Infomation

[gene=LOC107787379] [db_xref=GeneID:107787379] [protein=two-component response regulator ARR11-like] [protein_id=XP_016464421.1] [location=complement(join(37358..38260,38541..38617,38761..39120,39203..39355,40581..40725))] [gbkey=CDS]
Sequence

ATGATGGAGAATAGTAAGACCACTGCAGGGTTTTCTTCTCCAAGAAGTGATAATTTCCCG
GCTGGTCTACGGGTTCTTGTTGTTGATGATGATCCTACCTGGTTGAAAATTCTTGAAAAG
ATGCTTAAGAAGTGCTCTTATGAAGTGACGGTATGTGGTCTAGCACGAGAGGCTCTGAAT
CTGCTCCGAGAAAGAAAGGATGGGTTTGACATTGTGATTAGTGATGTTAACATGCCTGAC
ATGGATGGATTTAAGCTTCTTGAGCATGTTGGACTTGAGATGGATCTTCCTGTCATAATG
ATGTCTGTCGATGGAGAAACAAGCAGGGTGATGAAGGGCGTTCAACACGGTGCATGTGAT
TATCTCTTGAAGCCTATACGGATGAAAGAACTTAGAAACATATGGCAGCATGTCCTCAGA
AAAAGGATGCACGAGGCAAGGGACATCGGAAACCATGAAATGGACCAATTTGATGAAGTG
TGGATGCTTAATGGAACTGAACTCCTTTCGGGCAAGAAGAGAAAAGATTTTGACAATGAA
AAAGAAATTTCTGATTCAAGATGTGTTGATTCTTCTTCCATGAAGAAAGCCAGAGTAGTT
TGGACTGTAGATCTTCATCAGAAATTTGTCAAAGCCGTAAACCAGATTGGATTTGACAAA
GCTGGTCCCAAGAAGATACTGGACTTGATGGGTGTTCCATGGTTGACTAGAGAAAATGTT
GCTAGCCACTTACAGAAGTATCGCCTATACTTGACTAGGTTGCAGAAAGAAAATGAAGTC
AAAGCTTCATTTTGTGGGATGAAGCATCCGAATGTTTCTTCTAAAGAAAATTCTCCTCAG
AATCCAGTGGATGTGTGCGCTGATGTTATAAATGACAAGTGTAGTGGTGTTTCTGGAGAC
AAGGCTATTGTTCAAAATGGGAAGGCCAACATATATGAGAGCAAGGTAAAGGGTGTTGTT
TCAATGCCAGTAGCAGAGCCTAGGTCTGTGGTTGGAGATAACTTTGGTTCAAAGACAAGC
CTCAGTGATTCCTTTGCATTGATCAATACCGATGTAAAAAGTCTCAATGTACCCACTCCA
TATTGCTTTACTGGAGAAGCTCCACAACCTCAATACAAACAAGATTTCAAACCACGTTTT
CCGTCTTGCACACAACCAACTTGTTCTCTCAACTTTGTACCTTCTCATGAAGTGAGGGAC
AGAGTTTCCAGTAAAGAAAATAAGCCTTCTTTCTTCAAGAGCAGAAGTGGAGTAGGAAAA
TTATCTGCATTGGAAGCCATTCAACCTGTGAGCCATCAAATAAATTTTCATGCTCTTGAG
CAAATTCCAAGTACTACATGGAGTATGACGAGTCAAAATGTAGATCAAAATCTAGTCAAT
GGTCTGCAATCAAGCCCAGGAAATCTAACTTTGGGAAGTGGATCAGTTGTTGCATCTCTA
GGTGAGGATGCTTCTATTCAAGGTGAATGTTTTCCAGCTTATTATGGACTTCGGAACATA
CAACAATTTGACTACAGTGATCCACAAACCATTTCTGGAGTTCCAACATGCTTGTATGAT
ACATTGAGGTTTGATTATGAGTATCCAAATGATTCATTGGAAGGTATTGTGTTGGACCAA
GGTCTGTTCATAGTCTAA

Peptide Sequence

PEP ID

XP_016464421.1
PEP Infomation

PREDICTED: two-component response regulator ARR11-like [Nicotiana tabacum]
Sequence

MMENSKTTAGFSSPRSDNFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTVCGLAREALN
LLRERKDGFDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACD
YLLKPIRMKELRNIWQHVLRKRMHEARDIGNHEMDQFDEVWMLNGTELLSGKKRKDFDNE
KEISDSRCVDSSSMKKARVVWTVDLHQKFVKAVNQIGFDKAGPKKILDLMGVPWLTRENV
ASHLQKYRLYLTRLQKENEVKASFCGMKHPNVSSKENSPQNPVDVCADVINDKCSGVSGD
KAIVQNGKANIYESKVKGVVSMPVAEPRSVVGDNFGSKTSLSDSFALINTDVKSLNVPTP
YCFTGEAPQPQYKQDFKPRFPSCTQPTCSLNFVPSHEVRDRVSSKENKPSFFKSRSGVGK
LSALEAIQPVSHQINFHALEQIPSTTWSMTSQNVDQNLVNGLQSSPGNLTLGSGSVVASL
GEDASIQGECFPAYYGLRNIQQFDYSDPQTISGVPTCLYDTLRFDYEYPNDSLEGIVLDQ
GLFIV

Transcript Sequence

Gene sequence data has not been registered.